Can structural MRI radiomics predict DIPG histone H3 mutation and patient overall survival at diagnosis time?

Jessica Goya-Outi, Raphael Calmon, Fanny Orlhac, Cathy Philippe, Nathalie Boddaert, Stephanie Puget, Irene Buvat, Vincent Frouin, Jacques Grill, Frederique Frouin

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

5 Citations (Scopus)

Abstract

Radiomics was proposed to identify tumor phenotypes noninvasively from quantitative imaging features. The present study aimed at investigating if radiomic features measured at diagnosis time from structural MRI can predict histone H3 mutations and overall survival of patients with diffuse intrinsic pontine glioma. To this end, 316 radiomic features from multimodal diagnostic MRI of 38 patients were extracted, and three clinical parameters were added. Two approaches for computing radiomic features were proposed: A global estimation from a spherical region of interest defined inside the tumor and a local estimation where features are computed inside the previously defined region from fixed size spherical patches and the mean of these features is considered. A feature selection pipeline was then developed. Three machine learning models for H3 mutation classification and three regression models for overall survival prediction were used. Leave-one-out F1-weighted scores for SVM model combining imaging and clinical features reached 0.83, showing a good prediction of H3 mutation using structural MRI. Results on overall survival prediction are not conclusive and suggest the need of a larger number of patients.

Original languageEnglish
Title of host publication2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019 - Proceedings
PublisherInstitute of Electrical and Electronics Engineers Inc.
ISBN (Electronic)9781728108483
DOIs
Publication statusPublished - 1 May 2019
Externally publishedYes
Event2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019 - Chicago, United States
Duration: 19 May 201922 May 2019

Publication series

Name2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019 - Proceedings

Conference

Conference2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019
Country/TerritoryUnited States
CityChicago
Period19/05/1922/05/19

Keywords

  • Image Standardization
  • Machine Learning
  • Radiomics
  • Rare Cancer
  • Structural MRI

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