Ten Years of Standardizing Proteomic Data: A Report on the HUPO-PSI Spring Workshop: April 12-14th, 2012, San Diego, USA S. Orchard et al

Sandra Orchard, Pierre Alain Binz, Christoph Borchers, Michael K. Gilson, Andrew R. Jones, George Nicola, Juan Antonio Vizcaino, Eric W. Deutsch, Henning Hermjakob

Research output: Contribution to journalArticlepeer-review

16 Citations (Scopus)

Abstract

The Human Proteome Organisation Proteomics Standards Initiative (HUPO-PSI) was established in 2002 with the aim of defining community standards for data representation in proteomics and facilitating data comparison, exchange and verification. Over the last 10 years significant advances have been made, with common data standards now published and implemented in the field of both mass spectrometry and molecular interactions. The 2012 meeting further advanced this work, with the mass spectrometry groups finalising approaches to capturing the output from recent developments in the field, such as quantitative proteomics and SRM. The molecular interaction group focused on improving the integration of data from multiple resources. Both groups united with a guest work track, organized by the HUPO Technology/Standards Committee, to formulate proposals for data submissions from the HUPO Human Proteome Project and to start an initiative to collect standard experimental protocols.

Original languageEnglish
Pages (from-to)2767-2772
Number of pages6
JournalProteomics
Volume12
Issue number18
DOIs
Publication statusPublished - 1 Sept 2012
Externally publishedYes

Keywords

  • Data standardization
  • Human Proteome Organization
  • Proteomics Standards Initiative

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