Discovering and linking public omics data sets using the Omics Discovery Index

Yasset Perez-Riverol; Mingze Bai; Felipe Da Veiga Leprevost; Silvano Squizzato; Young Mi Park; Kenneth Haug; Adam J. Carroll; Dylan Spalding; Justin Paschall; Mingxun Wang; Noemi Del-Toro; Tobias Ternent; Peng Zhang; Nicola Buso; Nuno Bandeira; Eric W. Deutsch; David S. Campbell; Ronald C. Beavis; Reza M. Salek; Ugis Sarkans; Robert Petryszak; Maria Keays; Eoin Fahy; Manish Sud; Shankar Subramaniam; Ariana Barbera; Rafael C. Jiménez; Alexey I. Nesvizhskii; Susanna Assunta Sansone; Christoph Steinbeck; Rodrigo Lopez; Juan A. Vizcaíno; Peipei Ping; Henning Hermjakob

doi:10.1038/nbt.3790

Discovering and linking public omics data sets using the Omics Discovery Index

Yasset Perez-Riverol, Mingze Bai, Felipe Da Veiga Leprevost, Silvano Squizzato, Young Mi Park, Kenneth Haug, Adam J. Carroll, Dylan Spalding, Justin Paschall, Mingxun Wang, Noemi Del-Toro, Tobias Ternent, Peng Zhang, Nicola Buso, Nuno Bandeira, Eric W. Deutsch, David S. Campbell, Ronald C. Beavis, Reza M. Salek, Ugis SarkansRobert Petryszak, Maria Keays, Eoin Fahy, Manish Sud, Shankar Subramaniam, Ariana Barbera, Rafael C. Jiménez, Alexey I. Nesvizhskii, Susanna Assunta Sansone, Christoph Steinbeck, Rodrigo Lopez, Juan A. Vizcaíno, Peipei Ping, Henning Hermjakob

Résultats de recherche: Contribution à un journal › Letter › Revue par des pairs

133 Citations (Scopus)

langue originale	Anglais
Pages (de - à)	406-409
Nombre de pages	4
journal	Nature Biotechnology
Volume	35
Numéro de publication	5
Les DOIs	https://doi.org/10.1038/nbt.3790
état	Publié - 9 mai 2017
Modification externe	Oui

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10.1038/nbt.3790

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Perez-Riverol, Y., Bai, M., Da Veiga Leprevost, F., Squizzato, S., Park, Y. M., Haug, K., Carroll, A. J., Spalding, D., Paschall, J., Wang, M., Del-Toro, N., Ternent, T., Zhang, P., Buso, N., Bandeira, N., Deutsch, E. W., Campbell, D. S., Beavis, R. C., Salek, R. M., ... Hermjakob, H. (2017). Discovering and linking public omics data sets using the Omics Discovery Index. Nature Biotechnology, 35(5), 406-409. https://doi.org/10.1038/nbt.3790

@article{86c7b601a84740f2ba9dd8c99ebf75fb,

title = "Discovering and linking public omics data sets using the Omics Discovery Index",

author = "Yasset Perez-Riverol and Mingze Bai and {Da Veiga Leprevost}, Felipe and Silvano Squizzato and Park, {Young Mi} and Kenneth Haug and Carroll, {Adam J.} and Dylan Spalding and Justin Paschall and Mingxun Wang and Noemi Del-Toro and Tobias Ternent and Peng Zhang and Nicola Buso and Nuno Bandeira and Deutsch, {Eric W.} and Campbell, {David S.} and Beavis, {Ronald C.} and Salek, {Reza M.} and Ugis Sarkans and Robert Petryszak and Maria Keays and Eoin Fahy and Manish Sud and Shankar Subramaniam and Ariana Barbera and Jim{\'e}nez, {Rafael C.} and Nesvizhskii, {Alexey I.} and Sansone, {Susanna Assunta} and Christoph Steinbeck and Rodrigo Lopez and Vizca{\'i}no, {Juan A.} and Peipei Ping and Henning Hermjakob",

note = "Funding Information: This work has been supported by the US NIH BD2K grant U54 GM114833 and a National Natural Science Foundation of China grant (61501071). A.I.N. is supported by US National Institute of Health grant (R01-GM-094231). Y.P.-R. is supported by BBSRC 'PROCESS' grant (BB/K01997X/1). M.B. is supported by Projects of International Cooperation and Exchanges grant (2014DFB30010). M.W. is supported by an NIH grant (5P41GM103484-07). J.A.V. and N.d.-T. are supported by the Wellcome Trust (grant WT101477MA). T.T. is supported by the BBSRC 'ProteoGenomics' grant (BB/L024225/1). E.W.D. and D.S.C. are supported in part by grant (U24 AI117966- 02S1). S.-A.S. is supported in part by US NIH BD2K grant (1U24AI117966-01). M.W. and N.Bandeirawere supported by NIH grant (5P41GM103484-07). N.Bandeira was also partially supported as an Alfred P. Sloan Fellow. S.Subramaniam is supported by NIH grants U01 DK097430 and U01 CA198941.",

year = "2017",

month = may,

day = "9",

doi = "10.1038/nbt.3790",

language = "English",

volume = "35",

pages = "406--409",

journal = "Nature Biotechnology",

issn = "1087-0156",

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Perez-Riverol, Y, Bai, M, Da Veiga Leprevost, F, Squizzato, S, Park, YM, Haug, K, Carroll, AJ, Spalding, D, Paschall, J, Wang, M, Del-Toro, N, Ternent, T, Zhang, P, Buso, N, Bandeira, N, Deutsch, EW, Campbell, DS, Beavis, RC, Salek, RM, Sarkans, U, Petryszak, R, Keays, M, Fahy, E, Sud, M, Subramaniam, S, Barbera, A, Jiménez, RC, Nesvizhskii, AI, Sansone, SA, Steinbeck, C, Lopez, R, Vizcaíno, JA, Ping, P & Hermjakob, H 2017, 'Discovering and linking public omics data sets using the Omics Discovery Index', Nature Biotechnology, VOL. 35, Numéro 5, p. 406-409. https://doi.org/10.1038/nbt.3790

TY - JOUR

T1 - Discovering and linking public omics data sets using the Omics Discovery Index

AU - Perez-Riverol, Yasset

AU - Bai, Mingze

AU - Da Veiga Leprevost, Felipe

AU - Squizzato, Silvano

AU - Park, Young Mi

AU - Haug, Kenneth

AU - Carroll, Adam J.

AU - Spalding, Dylan

AU - Paschall, Justin

AU - Wang, Mingxun

AU - Del-Toro, Noemi

AU - Ternent, Tobias

AU - Zhang, Peng

AU - Buso, Nicola

AU - Bandeira, Nuno

AU - Deutsch, Eric W.

AU - Campbell, David S.

AU - Beavis, Ronald C.

AU - Salek, Reza M.

AU - Sarkans, Ugis

AU - Petryszak, Robert

AU - Keays, Maria

AU - Fahy, Eoin

AU - Sud, Manish

AU - Subramaniam, Shankar

AU - Barbera, Ariana

AU - Jiménez, Rafael C.

AU - Nesvizhskii, Alexey I.

AU - Sansone, Susanna Assunta

AU - Steinbeck, Christoph

AU - Lopez, Rodrigo

AU - Vizcaíno, Juan A.

AU - Ping, Peipei

AU - Hermjakob, Henning

N1 - Funding Information: This work has been supported by the US NIH BD2K grant U54 GM114833 and a National Natural Science Foundation of China grant (61501071). A.I.N. is supported by US National Institute of Health grant (R01-GM-094231). Y.P.-R. is supported by BBSRC 'PROCESS' grant (BB/K01997X/1). M.B. is supported by Projects of International Cooperation and Exchanges grant (2014DFB30010). M.W. is supported by an NIH grant (5P41GM103484-07). J.A.V. and N.d.-T. are supported by the Wellcome Trust (grant WT101477MA). T.T. is supported by the BBSRC 'ProteoGenomics' grant (BB/L024225/1). E.W.D. and D.S.C. are supported in part by grant (U24 AI117966- 02S1). S.-A.S. is supported in part by US NIH BD2K grant (1U24AI117966-01). M.W. and N.Bandeirawere supported by NIH grant (5P41GM103484-07). N.Bandeira was also partially supported as an Alfred P. Sloan Fellow. S.Subramaniam is supported by NIH grants U01 DK097430 and U01 CA198941.

PY - 2017/5/9

Y1 - 2017/5/9

UR - http://www.scopus.com/inward/record.url?scp=85019158200&partnerID=8YFLogxK

U2 - 10.1038/nbt.3790

DO - 10.1038/nbt.3790

M3 - Letter

C2 - 28486464

AN - SCOPUS:85019158200

SN - 1087-0156

VL - 35

SP - 406

EP - 409

JO - Nature Biotechnology

JF - Nature Biotechnology

IS - 5

ER -