TY - JOUR
T1 - SparseConvMIL
T2 - 2021 MICCAI Workshop on Computational Pathology, COMPAY 2021
AU - Lerousseau, Marvin
AU - Vakalopoulou, Maria
AU - Deutsch, Eric
AU - Paragios, Nikos
N1 - Publisher Copyright:
© PMLR, 2021.
PY - 2021/1/1
Y1 - 2021/1/1
N2 - Multiple instance learning (MIL) is the preferred approach for whole slide image classification. However, most MIL approaches do not exploit the interdependencies of tiles extracted from a whole slide image, which could provide valuable cues for classification. This paper presents a novel MIL approach that exploits the spatial relationship of tiles for classifying whole slide images. To do so, a sparse map is built from tiles embeddings, and is then classified by a sparse-input CNN. It obtained state-of-the-art performance over popular MIL approaches on the classification of cancer subtype involving 10, 000 whole slide images. Our results suggest that the proposed approach might (i) improve the representation learning of instances and (ii) exploit the context of instance embeddings to enhance the classification performance. The code of this work is open-source at https://github.com/MarvinLer/SparseConvMIL.
AB - Multiple instance learning (MIL) is the preferred approach for whole slide image classification. However, most MIL approaches do not exploit the interdependencies of tiles extracted from a whole slide image, which could provide valuable cues for classification. This paper presents a novel MIL approach that exploits the spatial relationship of tiles for classifying whole slide images. To do so, a sparse map is built from tiles embeddings, and is then classified by a sparse-input CNN. It obtained state-of-the-art performance over popular MIL approaches on the classification of cancer subtype involving 10, 000 whole slide images. Our results suggest that the proposed approach might (i) improve the representation learning of instances and (ii) exploit the context of instance embeddings to enhance the classification performance. The code of this work is open-source at https://github.com/MarvinLer/SparseConvMIL.
KW - Large-scale Histopathology
KW - Multiple Instance Learning
KW - Whole Slide Image Classification
UR - http://www.scopus.com/inward/record.url?scp=85163854238&partnerID=8YFLogxK
M3 - Conference article
AN - SCOPUS:85163854238
SN - 2640-3498
VL - 156
SP - 129
EP - 139
JO - Proceedings of Machine Learning Research
JF - Proceedings of Machine Learning Research
Y2 - 27 September 2021
ER -